PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC1BG069460.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 312aa MW: 34548.9 Da PI: 8.7152 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 65.5 | 9.6e-21 | 127 | 180 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ Wt eLH++Fvea ++L + A+Pk+il+lm+ + Lt+e+++SHLQk+R+ TRIDC1BG069460.3 127 KARVIWTDELHKKFVEAHDKL-LPGDAVPKKILKLMNDPTLTRENIASHLQKHRM 180 68*******************.8999****************************7 PP | |||||||
2 | Myb_DNA-binding | 37.7 | 4.8e-12 | 131 | 179 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT e+++++v+a+ +l +g +k+I + m+ ++t++++ s++qk++ TRIDC1BG069460.3 131 IWTDELHKKFVEAHDKLLPGdaVPKKILKLMNdPTLTRENIASHLQKHR 179 6****************9999**************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 312 aa Download sequence |
DMHSLGCGAP ALELLECAVG EMHVHTHVIS KNGDRYGPLE MKDLGIIRNA IYNEATNGSK 60 SPGAMPNSPC NNSSVETTPT TTTLVISGRR ATRRRMGRTR VNDTNSQELD EVNVKNEKQK 120 PVEKPTKARV IWTDELHKKF VEAHDKLLPG DAVPKKILKL MNDPTLTREN IASHLQKHRM 180 NLDPLRKGNT GTRNKKLTPP QASLLSPNLS RQQASSTMMQ SLSSANFPEI ITTQAVVCMN 240 HNMNDSGSHP VIQMKSFKAS EDMYTGDNES TKNSTWSGGN SDNAGCQENS IEFSIKEPKL 300 SWDQVYFYTN GN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G16110.1 | 2e-16 | ARR-B family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC1BG069460.3 |