PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG068680.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 90aa MW: 10063.2 Da PI: 7.6837 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.1 | 8.4e-08 | 19 | 64 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W++ E + + +a + +G g W+++a+ mg ++++++ + ++q TRIDC1BG068680.1 19 EWSKKENKMFEEALAYYGEGapnLWDKVASAMGGTKSAEEARRHFQ 64 7*******************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 90 aa Download sequence |
LKMSSGSSSR STSPSSDSEW SKKENKMFEE ALAYYGEGAP NLWDKVASAM GGTKSAEEAR 60 RHFQILVDDV NSIEHGRIPF PKYKTQGFWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 9e-24 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG068680.1 |