PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG068110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 84aa MW: 9398.38 Da PI: 5.85 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.7 | 1.1e-07 | 14 | 60 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrwqky 47 W++ E + + +a + +G g + +a+ mg ++++++++ ++q + TRIDC1BG068110.1 14 EWSKKENKMFEEALAYYGEGapNLWEVASAMGGTKSAEEVRRHFQVL 60 7*******************9977788*****9************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 84 aa Download sequence |
GSSSRSTSPS SGSEWSKKEN KMFEEALAYY GEGAPNLWEV ASAMGGTKSA EEVRRHFQVL 60 VDDISNIEYG RIPFPKYKTQ GFWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19510.1 | 7e-22 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG068110.1 |