PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG064140.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 120aa MW: 13410.2 Da PI: 10.2451 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37.3 | 6.4e-12 | 50 | 90 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 T++Ed + + + G++ W+ Ia++++ gRt++++k++w++ TRIDC1BG064140.3 50 YTEQEDRVICSLYASIGSR-WSIIASKLP-GRTDNDVKNYWNT 90 69*****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence |
YARMDADGGD RRSHAHRVIS CGAAGLNRCG KSCRLRWLNY LRPDIRHGGY TEQEDRVICS 60 LYASIGSRWS IIASKLPGRT DNDVKNYWNT KLKKKAMPMR GPHYHHHAGL GLEAGAGAFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 5e-42 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG064140.3 |