PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG063360.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 279aa MW: 31917.6 Da PI: 5.1513

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG063360.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	63.4	5.3e-20	2	54	41	102
HHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 41 LpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkks 102 Lp+ Fkhsnf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+++ll+ ikr+k TRIDC1BG063360.2 2 LPRLFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQRHLLKMIKRRKP 54 99**********************999.........*******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
LLPRLFKHSN FSSFVRQLNT YGFRKVDPDR WEFANEGFLR GQRHLLKMIK RRKPPSNAPS 60 SQQQALTSCL EVGEFGFEEE IDRLKRDKNL LITEVVKLRQ EQQATKDNVQ AMEGRLRAAE 120 QRQAQMMGFL ARAMRNPHFF QQLVQKQDKR KELEDAISKK RRRPIDNAPF YGPAATTSQS 180 EQLDSQFLFD SGVLSEPGMN GMENLAQNIQ ELGQGKTDEE KKDEANGQLD INNDFWAELF 240 SDDFGDGDGS GLSELEGRRP EDIDELAQQL GYLSSTSPQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	46	52	LKMIKRR
2	149	163	KRKELEDAISKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	4e-77	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG063360.2