PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG061600.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 91aa    MW: 10440 Da    PI: 9.7063
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG061600.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.21.4e-161865148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEde+l+  + ++G g+W++++r  g++R++k+c++rw++yl
  TRIDC1BG061600.3 18 KGLWSPEEDEKLYGHIIRYGVGCWSSVPRLAGLHRCGKSCRLRWLNYL 65
                      678********************************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MGRPTSGGVQ QQQPKLRKGL WSPEEDEKLY GHIIRYGVGC WSSVPRLAGL HRCGKSCRLR  60
WLNYLRPDLK RGTFSQEEED HIVALHQILG N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G57560.17e-42MYB family protein