PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG061590.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 293aa    MW: 32289.9 Da    PI: 5.3792
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG061590.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding491.4e-151865148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEde+l+  + ++G g+W++++r  g++R++k+c++rw++yl
  TRIDC1BG061590.1 18 KGLWSPEEDEKLYGHIIRYGVGCWSSVPRLAGLHRCGKSCRLRWLNYL 65
                      678*******************************************97 PP
2Myb_DNA-binding52.31.3e-1671114146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg +++eE++ +v +++ lG++ W+ Ia++++ gRt++++k++w++
  TRIDC1BG061590.1  71 RGTFSQEEEDHIVALHQILGNR-WSQIASHLP-GRTDNEIKNFWNS 114
                       899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MGRPTSGGVQ QQQPKLRKGL WSPEEDEKLY GHIIRYGVGC WSSVPRLAGL HRCGKSCRLR  60
WLNYLRPDLK RGTFSQEEED HIVALHQILG NRWSQIASHL PGRTDNEIKN FWNSCIKKKL  120
RQQGIDPATH KPMASGAATT ALPDVEVEDR KPLAAGADGS LALKQSAEFD PFPVCADYGG  180
GFSGELGAAN AAALYVQFGH CKDGADEDAG FGAADYSCVL DVSENLGYGE SSSNSSNWNY  240
GSEVGSVLDG EVLHWGKAEM ERQHDEPLEH KFSLPCQEQS LLANFEFNLE QYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.16e-70MYB family protein