PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG061560.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 293aa    MW: 32001.7 Da    PI: 5.5843
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG061560.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.33.2e-171663148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEde+l++ + ++G g+W++++r  g++R++k+c++rw +yl
  TRIDC1BG061560.1 16 KGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAGLNRCGKSCRLRWINYL 63
                      678*******************************************97 PP
2Myb_DNA-binding49.68.9e-1669112146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg ++++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w++
  TRIDC1BG061560.1  69 RGCFSQQEEDHIVALHQILGNR-WSQIASHLP-GRTDNEIKNFWNS 112
                       899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MGRPSSGGVG QPKLRKGLWS PEEDEKLYNH IIRHGVGCWS SVPRLAGLNR CGKSCRLRWI  60
NYLRPDLKRG CFSQQEEDHI VALHQILGNR WSQIASHLPG RTDNEIKNFW NSCIKKKLRR  120
QGLDPATHKP MANADTATAA LPDAQEEDRK PLAAAADGSL APKQPAVFDP FPVCADYGAG  180
FADGLGTANA AALYGQFGCG KEGADDDAGF GTADYSCVLD VSDNLGYGES SSNSSNWNYA  240
GEVGSVLDGE VPHWAKPEME QQHTPLEHKL SLPCQEQSLL ASFDFNLELE PYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.12e-71MYB family protein