PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG061550.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 291aa MW: 32169.8 Da PI: 6.0408

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG061550.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.2	3.3e-17	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ + ++G g+W++++r g++R++k+c++rw +yl TRIDC1BG061550.3 18 KGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAGLNRCAKSCRLRWINYL 65 678*******************************************97 PP
2	Myb_DNA-binding	49.6	8.8e-16	71	114	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w++ TRIDC1BG061550.3 71 RGCFSQQEEDHIVALHQILGNR-WSQIASHLP-GRTDNEIKNFWNS 114 899*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
QQNGTSIVRR RGQPKLRKGL WSPEEDEKLY NHIIRHGVGC WSSVPRLAGL NRCAKSCRLR 60 WINYLRPDLK RGCFSQQEED HIVALHQILG NRWSQIASHL PGRTDNEIKN FWNSCIKKKL 120 RQQGIDPATH KPLAAADTAT SALPDMEKED HKPLAAAAGS SLATKQPSVF DPFPVCVDYG 180 AGFADGLGAA NAAGFGAADY SCVLDVPENL GYGESSSNSS NRNYSGEVGS MLDGEAGSVL 240 DGEVLHWVKA EPAFAEMERQ HDVLLEYDFS LPCQEQSLLA NFEFNLEQYF X

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	4e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG061550.3