PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG061550.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 227aa MW: 24350 Da PI: 4.2143

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG061550.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.3	1.8e-08	14	36	23	46
-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46 +W+ Ia++++ gRt++++k++w++ TRIDC1BG061550.2 14 RWSQIASHLP-GRTDNEIKNFWNS 36 5*******.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MLMRVVSCLV CACRWSQIAS HLPGRTDNEI KNFWNSCIKK KLRQQGIDPA THKPLAAADT 60 ATSALPDMEK EDHKPLAAAA GSSLATKQPS VFDPFPVCVD YGAGFADGLG AANAAALYGQ 120 FGSGKEDTDD DAGFGAADYS CVLDVPENLG YGESSSNSSN RNYSGEVGSM LDGEAGSVLD 180 GEVLHWVKAE PAFAEMERQH DVLLEYDFSL PCQEQSLLAN FEFNLEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	4e-21	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG061550.2