PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG061540.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 302aa    MW: 32824.5 Da    PI: 4.7188
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG061540.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.23.3e-171360148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEde+l++ + ++G g+W++++r  g++R++k+c++rw +yl
  TRIDC1BG061540.4 13 KGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAGLNRCGKSCRLRWINYL 60
                      678*******************************************97 PP
2Myb_DNA-binding45.32e-1467109246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g ++++E++ +v +++  G++ W+ Ia++++ gRt++++k++w++
  TRIDC1BG061540.4  67 GCFSQQEEDHIVALHQIIGNR-WSQIASHLP-GRTDNEIKNFWNS 109
                       789******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
PSSGGVVQPK LRKGLWSPEE DEKLYNHIIR HGVGCWSSVP RLAGLNRCGK SCRLRWINYL  60
RPDLKHGCFS QQEEDHIVAL HQIIGNRWSQ IASHLPGRTD NEIKNFWNSC IKKKLRQQGI  120
DPATHKPMGT ADMATAALPD TEGEDSKPHT AAADGSLAPK QSAVFDPFPV CADYGAGFAD  180
DLGAANAAAL YGQLCGGKEG ADEDAGFGAA DYSCVLDVPE NLGYGESSSN SSNRSYGGEV  240
GSMLDGEVGS VLDGEVLYLA KAEPAFAEME RQHDVLLEYE FSLPCQEQSL LANFEFNLEH  300
YF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.12e-70MYB family protein