PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG061540.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 299aa    MW: 32161.8 Da    PI: 4.8538
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG061540.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.23.3e-171663148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEde+l++ + ++G g+W++++r  g++R++k+c++rw +yl
  TRIDC1BG061540.3 16 KGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAGLNRCGKSCRLRWINYL 63
                      678*******************************************97 PP
2Myb_DNA-binding45.41.9e-1470112246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g ++++E++ +v +++  G++ W+ Ia++++ gRt++++k++w++
  TRIDC1BG061540.3  70 GCFSQQEEDHIVALHQIIGNR-WSQIASHLP-GRTDNEIKNFWNS 112
                       789******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MGRPSSGGVV QPKLRKGLWS PEEDEKLYNH IIRHGVGCWS SVPRLAGLNR CGKSCRLRWI  60
NYLRPDLKHG CFSQQEEDHI VALHQIIGNR WSQIASHLPG RTDNEIKNFW NSCIKKKLRQ  120
QGIDPATHKP MGTADMATAA LPDTEGEDSK PHTAAADGSL APKQSAVFDP FPVCADYGAG  180
FADDLGAANA AALYGQLCGG KEGADEDAGF GAADYSCVLD VPENLGYGES SSNSSNRSYG  240
GEVGSMLDGE VGSVLDGEVL YLAKAEPAFA EMERQHDVLL EYEFSLPCQE QSLLGSCAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.15e-71MYB family protein