PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG061010.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 720aa MW: 84261.5 Da PI: 9.2431

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG061010.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.4	1.4e-19	19	104	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YAk+ GF v ++++++ ++ + + t+ C+++gk++ ++k+ + +++++tr++C ak++ +++ ++k+++t++ l+HnH+++p TRIDC1BG061010.4 19 NFYKDYAKKEGFGVIRRTTRHG-EDSKLVYFTLACNRQGKAQYSSKN---SFKPNPSTRMQCPAKINFSRR-EEKFCITSITLDHNHPISP 104 6*************999998.6666999*********9999...999**************.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 720 aa Download sequence
MMLQPKKGMT FDSEDAVVNF YKDYAKKEGF GVIRRTTRHG EDSKLVYFTL ACNRQGKAQY 60 SSKNSFKPNP STRMQCPAKI NFSRREEKFC ITSITLDHNH PISPSKARFL RCHKKLDLHA 120 KRRLELNDQA GIRLNKKFGS LVMEAGGYVN LEFGEKECRN YLQETRRLKL GAGDAHAVYQ 180 YFLRMQSKDP DFFHLMDVDK DGRLRNVFWA DARSRAAYES YCDVITFDTT YLTNKYSMPF 240 APFVGVNHHG ESVLLGCGLL SNEDTDTFAW LFKSWLCCMS NKPPNAIITD QCKAMQNAIE 300 EVFPQARHRW CIWHIMKKIP EKLSGYDKYE NIKYTLSNVV YDSLTKCDFD KAWVEMINKY 360 DLHENEWLAG LYDEKNRWVP AYVKDTFWAG MSSTKRSESV NAFFDGYVHA RTTLKQFVEQ 420 YENALRDKVE KETKADSKSF QEEIPCITHF DFEKQFQAAY TNAKFQEFQE QLRGKIYCYP 480 SLQNNEGPLL TFRVREDRKI FFEGEDGSIK EKWIISDFTV LFKQEECDVR CICRLFEFRG 540 ILCSHIITVL ALMGIKDVPS RYILQRWRND FKRKHVFIKC SYDDMLNTPV VQRYDELCKR 600 SHEVAEKGAE PDELRDLVMD GLDQLERKVD AYRASHAVQV QAENPTSKHE DTMLNKEKLV 660 LSPIPVRSAG RPRSKRKISK VDQVIQKLRA KKRQVPTSTT KVQTHKGRKL FFFRGIFNMK

Sequence ? help Back to Top

Protein Sequence Length: 720 aa Download sequence

MMLQPKKGMT FDSEDAVVNF YKDYAKKEGF GVIRRTTRHG EDSKLVYFTL ACNRQGKAQY  60
SSKNSFKPNP STRMQCPAKI NFSRREEKFC ITSITLDHNH PISPSKARFL RCHKKLDLHA  120
KRRLELNDQA GIRLNKKFGS LVMEAGGYVN LEFGEKECRN YLQETRRLKL GAGDAHAVYQ  180
YFLRMQSKDP DFFHLMDVDK DGRLRNVFWA DARSRAAYES YCDVITFDTT YLTNKYSMPF  240
APFVGVNHHG ESVLLGCGLL SNEDTDTFAW LFKSWLCCMS NKPPNAIITD QCKAMQNAIE  300
EVFPQARHRW CIWHIMKKIP EKLSGYDKYE NIKYTLSNVV YDSLTKCDFD KAWVEMINKY  360
DLHENEWLAG LYDEKNRWVP AYVKDTFWAG MSSTKRSESV NAFFDGYVHA RTTLKQFVEQ  420
YENALRDKVE KETKADSKSF QEEIPCITHF DFEKQFQAAY TNAKFQEFQE QLRGKIYCYP  480
SLQNNEGPLL TFRVREDRKI FFEGEDGSIK EKWIISDFTV LFKQEECDVR CICRLFEFRG  540
ILCSHIITVL ALMGIKDVPS RYILQRWRND FKRKHVFIKC SYDDMLNTPV VQRYDELCKR  600
SHEVAEKGAE PDELRDLVMD GLDQLERKVD AYRASHAVQV QAENPTSKHE DTMLNKEKLV  660
LSPIPVRSAG RPRSKRKISK VDQVIQKLRA KKRQVPTSTT KVQTHKGRKL FFFRGIFNMK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	671	681	RPRSKRKISKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-135	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG061010.4