PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG060280.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 269aa    MW: 30107 Da    PI: 9.7721
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG060280.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.72.6e-12557855
               AP2  8 wdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
                      +++++gr++A+++d  s+n    k+ k+++lg ++ +e Aa+a++ a++k++g
  TRIDC1BG060280.3  5 RHRWTGRYEAHLWDkNSWNPtqrKKgKQVYLGAYDEEEAAARAYDLAALKYWG 57
                      799***********888855666447*************************98 PP
2AP256.28.5e-18100151155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV +++++grW+A+I   +   g +k+ +lg++gt eeAa+a++ a+ +++g
  TRIDC1BG060280.3 100 SKYRGVARHHQNGRWEARIGRvF---G-NKYLYLGTYGTQEEAARAYDIAAIEYKG 151
                       89****************99966...3.6***********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MHGCRHRWTG RYEAHLWDKN SWNPTQRKKG KQVYLGAYDE EEAAARAYDL AALKYWGATT  60
YTNFPVMDYD KELKIMETLT KEEYLASLRR KSSGFSRGVS KYRGVARHHQ NGRWEARIGR  120
VFGNKYLYLG TYGTQEEAAR AYDIAAIEYK GVNAVTNFDL RSYITWLKPP VAGPAVLADH  180
LLAGMHTQLP PSPVEHERFL PAEAHVMLPP TTAGASPGSP FILDHSAAAL GGGLRRRSSS  240
SSSSTALSLL LKSTMFKQLV ERNDPDSPQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12432PTQRKKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.13e-76AP2 family protein