PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG060230.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 253aa MW: 28599.8 Da PI: 6.893 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.6 | 8.8e-11 | 157 | 200 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT +E++l++++ +G g+Wk I++++ +++t q+ s+ qky TRIDC1BG060230.2 157 WTIDEHKLFLRGLGVYGRGDWKNISKHFVTTKTHVQVSSHAQKY 200 *******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
HSSYYPQVCN FDLSSLMDPL VNQGWTSSEE EEARSAIARH NSHTIVYDDK NKRHNNIVDA 60 LHELFPSKTR QQEIGASNIC GINTMGVHVI GGYGIREEEE AATMNDNGLI FGHALEDTRI 120 METKEAPLMV HKNKMQILEN NITNDQPVVP PRQGRFWTID EHKLFLRGLG VYGRGDWKNI 180 SKHFVTTKTH VQVSSHAQKY FRRLHKRASF GTQRYSINDV GLHDEDPWSM NNSSGPSQTL 240 GSTGLNNETS LGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 5e-19 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG060230.2 |