PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG056900.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HB-other | ||||||||
Protein Properties | Length: 906aa MW: 99523.5 Da PI: 4.3501 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 31.2 | 3.6e-10 | 258 | 298 | 12 | 52 |
HHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 12 leeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 e+L+++F ++yps++ +e LA++lgLt qV WF R TRIDC1BG056900.6 258 NERLNQYFTTDQYPSRAVKESLAQELGLTFHQVNKWFESTR 298 589**********************************8766 PP | |||||||
2 | Homeobox | 35 | 2.4e-11 | 735 | 775 | 13 | 53 |
HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 ++L e F+ ++yps++ +e LA++lgLt rqV WF rR TRIDC1BG056900.6 735 QRLHEQFKTDQYPSRAVKESLAQELGLTFRQVEKWFESRRR 775 6899***********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 906 aa Download sequence |
MQNDVADLPS DDSEDDDFDP NISEEHVAGH AEGSSEEDGD EGSDSDDSNF MTSSDNSEHV 60 KEKVKVDDLG LPSEDSEDDD YDPAGPDSDK DIEEKQDESD FTSDSDEFCA EITKSCSKDE 120 VSSGPKVGGR TNDLEGAPVR PNTSMSHSKD LEIDPDVILP STKRQVQRLD YKKLYDDTYG 180 EAPSESSDGD EWSGKSTLKE DNEERNEVDS FARKSSRGTR AVHPDGFHGL VNDQHAGGLT 240 SAGSNSKANK RHFGPVINER LNQYFTTDQY PSRAVKESLA QELGLTFHQV NKWFESTRHA 300 RAAAMKNGTQ LEKQSNSRKK KSSDATHMEV KDQPNACKEE GIRQHSPVKQ DTDGGQRTHV 360 PPESSQSYTK TSGLIGCPKS ESRENHEKNT SSKYVGMPTD GSAEDQILEL EPEDEGSDSD 420 DLNFVTRSGN SEPLKNREKI DDLGLPSAYS EDDDYDSDEV IEMMQSSSDE SNFTTSSDNP 480 EDVKEKVDDL GLPSEDSEDD DYDPAGPGSD EDIGKKQSSS EKSHSSDKSE NRKTKRKVDD 540 LGLPSEDSED DDYDPASPDS DKDIEEKQDE SDFSSDSDDF CVEIAKSCCG QEGVPSGAKV 600 GADRTDDLEG TTICANAAIS NLPSKDPEMD QYVVLPVSAR QKVQSPDSKK LAAYGRAPSD 660 SSYSEELSKK GTPEKDKGKE SEAGSFVRQS NEFTPQRSQQ SFHGSVNGQN AEELLTPNGS 720 STTGQKRQYG PIINQRLHEQ FKTDQYPSRA VKESLAQELG LTFRQVEKWF ESRRRHIRVA 780 SNKGSTHVEN HSTKENPNEC KSDALNEDTP SGILNEGITQ DGPLKQDIGG GLKTNASTPN 840 SSQRYTTPLV RRPKGESREN HMKNTSSSSS GRPEGSDAGY AVLALEALDE KIRSKMLQEL 900 KKRKIG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19510.1 | 2e-11 | HB-PHD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG056900.6 |