PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG056900.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 602aa MW: 66079.2 Da PI: 4.517

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG056900.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	35.7	1.5e-11	431	471	13	53
HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 ++L e F+ ++yps++ +e LA++lgLt rqV WF rR TRIDC1BG056900.2 431 QRLHEQFKTDQYPSRAVKESLAQELGLTFRQVEKWFESRRR 471 6899***********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MKNGTQLEKQ SNSRKKKSSD ATHMEVKDQP NACKEEGIRQ HSPVKQDTDG GQRTHVPPES 60 SQSYTKTSGL IGCPKSESRE NHEKNTSSKY VGMPTDGSAE DQILELEPED EGSDSDDLNF 120 VTRSGNSEPL KNREKIDDLG LPSAYSEDDD YDSDEVIEMM QSSSDESNFT TSSDNPEDVK 180 EKVDDLGLPS EDSEDDDYDP AGPGSDEDIG KKQSSSEKSH SSDKSENRKT KRKVDDLGLP 240 SEDSEDDDYD PASPDSDKDI EEKQDESDFS SDSDDFCVEI AKSCCGQEGV PSGAKVGADR 300 TDDLEGTTIC ANAAISNLPS KDPEMDQYVV LPVSARQKVQ SPDSKKLAAY GRAPSDSSYS 360 EELSKKGTPE KDKGKESEAG SFVRQSNEFT PQRSQQSFHG SVNGQNAEEL LTPNGSSTTG 420 QKRQYGPIIN QRLHEQFKTD QYPSRAVKES LAQELGLTFR QVEKWFESRR RHIRVASNKG 480 STHVENHSTK ENPNECKSDA LNEDTPSGIL NEGITQDGPL KQDIGGGLKT NASTPNSSQR 540 YTTPLVRRPK GESRENHMKN TSSSSSGRPE GSDAGYAVLA LEALDEKIRS KMLQELKKRK 600 IG

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MKNGTQLEKQ SNSRKKKSSD ATHMEVKDQP NACKEEGIRQ HSPVKQDTDG GQRTHVPPES  60
SQSYTKTSGL IGCPKSESRE NHEKNTSSKY VGMPTDGSAE DQILELEPED EGSDSDDLNF  120
VTRSGNSEPL KNREKIDDLG LPSAYSEDDD YDSDEVIEMM QSSSDESNFT TSSDNPEDVK  180
EKVDDLGLPS EDSEDDDYDP AGPGSDEDIG KKQSSSEKSH SSDKSENRKT KRKVDDLGLP  240
SEDSEDDDYD PASPDSDKDI EEKQDESDFS SDSDDFCVEI AKSCCGQEGV PSGAKVGADR  300
TDDLEGTTIC ANAAISNLPS KDPEMDQYVV LPVSARQKVQ SPDSKKLAAY GRAPSDSSYS  360
EELSKKGTPE KDKGKESEAG SFVRQSNEFT PQRSQQSFHG SVNGQNAEEL LTPNGSSTTG  420
QKRQYGPIIN QRLHEQFKTD QYPSRAVKES LAQELGLTFR QVEKWFESRR RHIRVASNKG  480
STHVENHSTK ENPNECKSDA LNEDTPSGIL NEGITQDGPL KQDIGGGLKT NASTPNSSQR  540
YTTPLVRRPK GESRENHMKN TSSSSSGRPE GSDAGYAVLA LEALDEKIRS KMLQELKKRK  600
IG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	3e-09	HB-PHD family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG056900.2