PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG055500.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 187aa    MW: 20064.6 Da    PI: 7.5107
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG055500.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-174493355
               AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++GVr ++ +g+++AeIrd + ng   r++lg+f ++e Aa a+++a+ +++g
  TRIDC1BG055500.1 44 FRGVRKRP-WGKYAAEIRDSTRNG--VRVWLGTFESPEAAALAYDQAAFAMRG 93
                      8*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
LPPFDTDEKL LLNTLSQHEA AAAPLKQEAT DAEVAPGVGG GRAFRGVRKR PWGKYAAEIR  60
DSTRNGVRVW LGTFESPEAA ALAYDQAAFA MRGCAAVLNF PADQVRRSLE GAGEDVRGRA  120
HGVSPVLALK RRHSMRSRKA TASSPCRKAA RGRPEGVVME LEDLGAEYLE ELLGAADDMT  180
ASAYDSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-28ERF family protein