PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG055320.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 794aa MW: 90818.5 Da PI: 7.1228

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG055320.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.5	3.4e-16	190	271	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+++A +GF vr+ +++++ +k ++ C+++gk +++++ k++r+++ C+ak+ vk++ +++we + +++eHnH+l+p TRIDC1BG055320.7 190 RFYSTHAMLTGFAVRRGSNYRR------VKFDLECNRSGKLKPTEDL--KRKRRSNALGSRCQAKVIVKLH-NEQWEFIGVKHEHNHPLCP 271 5******************9......7889*******9988..555555566789*****9.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 794 aa Download sequence
RSEHTQVPNP PNQEQRAAAD AQMQAAVDNL GEQAPGPAPA TNLEQVAMTH PVEPNHSGAG 60 LHIEKENVGR QATPGGRLQL TVGNGQQEHA SNGIGTAAQG LLTDTSDKQS NSVDTRMQRH 120 AEEQDQLHGV TQGHEMSSND TSSGSDSGSS SGSELDTELG KCFYPSFEEL ENSRPPEIGM 180 RFPTLEDAER FYSTHAMLTG FAVRRGSNYR RVKFDLECNR SGKLKPTEDL KRKRRSNALG 240 SRCQAKVIVK LHNEQWEFIG VKHEHNHPLC PSPSLASFFL NHKYLSSEEK LFLRVLQQSR 300 VNPRKAMNIF RRMRSNFRKV SSIKEKVTSN SQCANQWRKE NSDVETALKR FKELELRNLG 360 FSYTMQKDED NIVRSLFWTD ARSKVDYEIF GDFISFNTTY STNRNNMPFT PIIGMNSHGR 420 ILVFGCALLQ DQKAETFKWM FQTFLHVMGG KLPRIVITDQ DEGMATAISE VMPQVRHRFC 480 KFSVMRKAQE MLGAFMAARS NMNAELHGLV DNSVTEKEFE EGWDVLTERY DASQNEYLRL 540 MWETRKNWVP VYFQADFCPF VESAGHCEVA NLLFKDNVLP KDRIEKFIEQ YERMQEHIVK 600 TEEEDALQSA TEPAYFSMQP IEKHAARIYT RQIFLIAQNE LYYSTAFNVH EIQGGYRLEK 660 VFNYENPEFS RNSFEVLAEP GTHAFKCQCA KFTRDGILCC HIFRVFTQLG VKEIPAQYML 720 PRWAPKFIED RLKEYEERCS KRRENKTRYA MLLGKMADIG KGICADGAKS GCFMLELDKV 780 QETLATTAEE IPRK

Sequence ? help Back to Top

Protein Sequence Length: 794 aa Download sequence

RSEHTQVPNP PNQEQRAAAD AQMQAAVDNL GEQAPGPAPA TNLEQVAMTH PVEPNHSGAG  60
LHIEKENVGR QATPGGRLQL TVGNGQQEHA SNGIGTAAQG LLTDTSDKQS NSVDTRMQRH  120
AEEQDQLHGV TQGHEMSSND TSSGSDSGSS SGSELDTELG KCFYPSFEEL ENSRPPEIGM  180
RFPTLEDAER FYSTHAMLTG FAVRRGSNYR RVKFDLECNR SGKLKPTEDL KRKRRSNALG  240
SRCQAKVIVK LHNEQWEFIG VKHEHNHPLC PSPSLASFFL NHKYLSSEEK LFLRVLQQSR  300
VNPRKAMNIF RRMRSNFRKV SSIKEKVTSN SQCANQWRKE NSDVETALKR FKELELRNLG  360
FSYTMQKDED NIVRSLFWTD ARSKVDYEIF GDFISFNTTY STNRNNMPFT PIIGMNSHGR  420
ILVFGCALLQ DQKAETFKWM FQTFLHVMGG KLPRIVITDQ DEGMATAISE VMPQVRHRFC  480
KFSVMRKAQE MLGAFMAARS NMNAELHGLV DNSVTEKEFE EGWDVLTERY DASQNEYLRL  540
MWETRKNWVP VYFQADFCPF VESAGHCEVA NLLFKDNVLP KDRIEKFIEQ YERMQEHIVK  600
TEEEDALQSA TEPAYFSMQP IEKHAARIYT RQIFLIAQNE LYYSTAFNVH EIQGGYRLEK  660
VFNYENPEFS RNSFEVLAEP GTHAFKCQCA KFTRDGILCC HIFRVFTQLG VKEIPAQYML  720
PRWAPKFIED RLKEYEERCS KRRENKTRYA MLLGKMADIG KGICADGAKS GCFMLELDKV  780
QETLATTAEE IPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-74	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG055320.7