PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG055240.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | CPP | ||||||||
Protein Properties | Length: 258aa MW: 29220.5 Da PI: 8.4154 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 46.1 | 1e-14 | 22 | 59 | 3 | 40 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+C Ckks+Clk+YC Cfa g +Cse+C C C+Nk TRIDC1BG055240.5 22 CKHCACKKSRCLKLYCPCFAGGGYCSEKCGCVPCFNKA 59 89**********************************97 PP | |||||||
2 | TCR | 50.2 | 5.3e-16 | 138 | 174 | 3 | 39 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++gCnCkks+ClkkYC+C+++g+ Cs C+CedCkN TRIDC1BG055240.5 138 RRGCNCKKSSCLKKYCDCYQDGTGCSLFCRCEDCKNP 174 589*********************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MNQLALATTP KRQKVEDAAD GCKHCACKKS RCLKLYCPCF AGGGYCSEKC GCVPCFNKAD 60 FAETVQTTRK VLLSRQKRMS LKINRRLEAN AETMVVFLTQ LDDVAFLSSF WLIIIISILC 120 LCHLQEDAHN SSSSTPPRRG CNCKKSSCLK KYCDCYQDGT GCSLFCRCED CKNPYGKNEG 180 FMADESKRFI YTGADLDHSE DEHDFIVERS PRLQSPISKE SSFQHTPPRS KASSRDTHLL 240 PQVLLQWQPR SWQQSSKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22760.1 | 1e-37 | CPP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG055240.5 |