PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG055240.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CPP
Protein Properties Length: 239aa    MW: 27300.5 Da    PI: 7.7201
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG055240.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR50.34.7e-162965339
               TCR  3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
                      ++gCnCkks+ClkkYC+C+++g+ Cs  C+CedCkN 
  TRIDC1BG055240.4 29 RRGCNCKKSSCLKKYCDCYQDGTGCSLFCRCEDCKNP 65
                      589*********************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MSLKINRRLE ANAETMEDAH NSSSSTPPRR GCNCKKSSCL KKYCDCYQDG TGCSLFCRCE  60
DCKNPYGKNE GFMADESKRF IYTGADLDHS EDEHDFIVER SPRLQSPISK ESSFQHTPPR  120
SKASSRDTHL LPQVLLQWQP RSWQQSSKRQ GNDHRAVDDS GENNKSSSHE WQLAKHQVQE  180
DTYSISRCVQ ILNGMVELSQ VEKSVAPDVF LHPGNREIFV SLGLDVRALW LKRKIQHLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22760.16e-21CPP family protein