PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG055240.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 328aa MW: 36927.7 Da PI: 8.2089

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG055240.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.6	1.4e-14	33	70	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+C Ckks+Clk+YC Cfa g +Cse+C C C+Nk TRIDC1BG055240.2 33 CKHCACKKSRCLKLYCPCFAGGGYCSEKCGCVPCFNKA 70 89**********************************97 PP
2	TCR	49.7	7.5e-16	118	154	3	39
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++gCnCkks+ClkkYC+C+++g+ Cs C+CedCkN TRIDC1BG055240.2 118 RRGCNCKKSSCLKKYCDCYQDGTGCSLFCRCEDCKNP 154 589*********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
EGPDALPDPG SMNQLALATT PKRQKVEDAA DGCKHCACKK SRCLKLYCPC FAGGGYCSEK 60 CGCVPCFNKA DFAETVQTTR KVLLSRQKRM SLKINRRLEA NAETMEDAHN SSSSTPPRRG 120 CNCKKSSCLK KYCDCYQDGT GCSLFCRCED CKNPYGKNEG FMADESKRFI YTGADLDHSE 180 DEHDFIVERS PRLQSPISKE SSFQHTPPRS KASSRDTHLL PQVLLQWQPR SWQQSSKRQG 240 NDHRAVDDSG ENNKSSSHEW QLAKHQVQED TYSISRCVQI LNGMVELSQV EKSVAPDVFL 300 HPGNREIFVS LGLDVRALWL KRKIQHLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22760.1	8e-43	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG055240.2