PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC1BG053140.9 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 859aa MW: 95104 Da PI: 5.4289 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.5 | 5.6e-07 | 710 | 752 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+ + +l++++ +q+G++ ++ I + ++ +++ q++ ++ TRIDC1BG053140.9 710 RAKWTKSDTDLFYQGLRQFGSD-FAMIQQLFP-DKSRDQVRQKFK 752 569*******************.*********.********9985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 859 aa Download sequence |
RHRRPTHSVL LRRCPPPLLP VLYLRAAGNR GLFKEGPKGS SSPSPGKHLR GVTSDFGRSK 60 QLPGGHKGGL DMIDDEANFG DITDAPAEAE AAVKFHPNKL RGKLRKKSVP SRSVVPNHTV 120 ETSDENAVAL SQDNLSQGLT TNQEITSSTV LGSETIGGAE ACGGTLYTPS DDVLTVSSVD 180 RLSQDDDPHD DPSEVATLQE NLVVSDTQAS STHPTSKTVD DLADFGELFD THSEEENVAK 240 SKLKIKVKLS KAASKSRKTG QKKAASTVDV VSQNKEDGND DLRGCNDEQV QAPRHEEHVQ 300 TSDSQPPLGT DDGTVDNFVN HNRILEEPGP EETAAKLRPK SQRKPGRASS KAVGTSDDHA 360 EANLKDINAS VDIDSEDGLI NPHTDDTQPI FGEPSAEAAA TFLLDLGKKK GKGKSVTFVL 420 PDDYEGVAAT DTNHNDIRSD ENLNTLPQQA PQKHCLTEEH SDDQEYTDRE SQYHDGERSD 480 HGVEQQSKLD VGKQELSMKL RSRTEIQKVG LSEHIVDDHL DEDFVEPSAT EQNNDSGDEN 540 TAGGKQKAPR KSRKKDPNKE PLRGSKRTST KSTSEKSQPN QQKNKSEVSS RGRKRALKDT 600 MTEQPEKKLT HRIRQKRAQE VQTLLQKPDH EIDRMKLSVT HLRLLQEARE RIQSKTPSGP 660 SSSNQSSSHF GDTDDFDPFG DNYDNDRTEN HALENATKLN YHSYMDKKTR AKWTKSDTDL 720 FYQGLRQFGS DFAMIQQLFP DKSRDQVRQK FKSEDKKHPM QVHDAILHRS RDNLYLKQVM 780 KQLNIEDSLK DINSTQKQEV ASTEGNTGND VISETNISVE NVSNLSDEEM GTLQSEVKEG 840 EDVAAGNADD VDLDVFDWY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G39160.1 | 3e-27 | MYB_related family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC1BG053140.9 |