PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG053140.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 858aa MW: 95017 Da PI: 5.4289

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG053140.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.5	5.6e-07	709	751	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+ + +l++++ +q+G++ ++ I + ++ +++ q++ ++ TRIDC1BG053140.8 709 RAKWTKSDTDLFYQGLRQFGSD-FAMIQQLFP-DKSRDQVRQKFK 751 569*****************.*****.******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 858 aa Download sequence
RHRRPTHSVL LRRCPPPLLP VLYLRAAGNR GLFKEGPKGS SSPSPGKHLR GVTSDFGRSK 60 QLPGGHKGGL DMIDDEANFG DITDAPAEAE AAVKFHPNKL RGKLRKKSVP SRSVVPNHTV 120 ETSDENAVAL SQDNLSQGLT TNQEITSSTV LGSETIGGAE ACGGTLYTPS DDVLTVSSVD 180 RLSQDDDPHD DPSEVATLQE NLVVSDTQAS STHPTSKTVD DLADFGELFD THSEEENVAK 240 SKLKIKVKLS KAASKSRKTG QKKAASTVDV VSQNKEDGND DLRGCNDEQV QAPRHEEHVQ 300 TSDSQPPLGT DDGTVDNFVN HNRILEEPGP EETAAKLRPK SQRKPGRASS KAVGTSDDHA 360 EANLKDINAS VDIDSEDGLI NPHTDDTQPI FGEPSAEAAA TFLLDLGKKK GKGKSVTFVL 420 PDDYEGVAAT DTNHNDIRSD ENLNTLPQQA PQKHCLTEEH SDDQEYTDRE SQYHDGERSD 480 HGVEQQSKLD VGKQELSMKL RSRTEIQKVG LSEHIVDDHL DEDFVEPSAT EQNNDSGDEN 540 TAGGKQKAPR KSRKKDPNKE PLRGSKRTST KSTSEKSQPN QQKNKSEVSS RGRKRALKDT 600 MTEQPEKKLT HRIRQKRAQE VQTLLQKPDH EIDRMKLSVT HLRLLQEARE RIQSKTPSGP 660 SSSNQSSHFG DTDDFDPFGD NYDNDRTENH ALENATKLNY HSYMDKKTRA KWTKSDTDLF 720 YQGLRQFGSD FAMIQQLFPD KSRDQVRQKF KSEDKKHPMQ VHDAILHRSR DNLYLKQVMK 780 QLNIEDSLKD INSTQKQEVA STEGNTGNDV ISETNISVEN VSNLSDEEMG TLQSEVKEGE 840 DVAAGNADDV DLDVFDWY

Sequence ? help Back to Top

Protein Sequence Length: 858 aa Download sequence

RHRRPTHSVL LRRCPPPLLP VLYLRAAGNR GLFKEGPKGS SSPSPGKHLR GVTSDFGRSK  60
QLPGGHKGGL DMIDDEANFG DITDAPAEAE AAVKFHPNKL RGKLRKKSVP SRSVVPNHTV  120
ETSDENAVAL SQDNLSQGLT TNQEITSSTV LGSETIGGAE ACGGTLYTPS DDVLTVSSVD  180
RLSQDDDPHD DPSEVATLQE NLVVSDTQAS STHPTSKTVD DLADFGELFD THSEEENVAK  240
SKLKIKVKLS KAASKSRKTG QKKAASTVDV VSQNKEDGND DLRGCNDEQV QAPRHEEHVQ  300
TSDSQPPLGT DDGTVDNFVN HNRILEEPGP EETAAKLRPK SQRKPGRASS KAVGTSDDHA  360
EANLKDINAS VDIDSEDGLI NPHTDDTQPI FGEPSAEAAA TFLLDLGKKK GKGKSVTFVL  420
PDDYEGVAAT DTNHNDIRSD ENLNTLPQQA PQKHCLTEEH SDDQEYTDRE SQYHDGERSD  480
HGVEQQSKLD VGKQELSMKL RSRTEIQKVG LSEHIVDDHL DEDFVEPSAT EQNNDSGDEN  540
TAGGKQKAPR KSRKKDPNKE PLRGSKRTST KSTSEKSQPN QQKNKSEVSS RGRKRALKDT  600
MTEQPEKKLT HRIRQKRAQE VQTLLQKPDH EIDRMKLSVT HLRLLQEARE RIQSKTPSGP  660
SSSNQSSHFG DTDDFDPFGD NYDNDRTENH ALENATKLNY HSYMDKKTRA KWTKSDTDLF  720
YQGLRQFGSD FAMIQQLFPD KSRDQVRQKF KSEDKKHPMQ VHDAILHRSR DNLYLKQVMK  780
QLNIEDSLKD INSTQKQEVA STEGNTGNDV ISETNISVEN VSNLSDEEMG TLQSEVKEGE  840
DVAAGNADDV DLDVFDWY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	3e-26	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG053140.8