PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC1BG053140.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 362aa MW: 41455.6 Da PI: 6.6024 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23 | 1.9e-07 | 213 | 255 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+ + +l++++ +q+G++ ++ I + ++ +++ q++ ++ TRIDC1BG053140.5 213 RAKWTKSDTDLFYQGLRQFGSD-FAMIQQLFP-DKSRDQVRQKFK 255 569*******************.*********.********9985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 362 aa Download sequence |
MKLRSRTEIQ KVGLSEHIVD DHLDEDFVEP SATEQNNDSG DENTAGGKQK APRKSRKKDP 60 NKEPLRGSKR TSTKSTSEKS QPNQQKNKSE VSSRGRKRAL KDTMTEQPEK KLTHRIRQKR 120 AQEVQTLLQK PDHEIDRMKL SVTHLRLLQE ARERIQSKTP SGPSSSNQSS SHFGDTDDFD 180 PFGDNYDNDR TENHALENAT KLNYHSYMDK KTRAKWTKSD TDLFYQGLRQ FGSDFAMIQQ 240 LFPDKSRDQV RQKFKSEDKK HPMQVHDAIL HRSRDNLYLK QVMKQLNIED SLKDINSTQK 300 QEVASTEGNT GNDVISETNI SVENVSNLSD EEMGTLQSEV KEGEDVAAGN ADDVDLDVFD 360 WY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G39160.1 | 3e-27 | MYB_related family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC1BG053140.5 |