PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG053140.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 842aa MW: 93100.8 Da PI: 5.1754

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG053140.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.5	5.5e-07	693	735	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+ + +l++++ +q+G++ ++ I + ++ +++ q++ ++ TRIDC1BG053140.12 693 RAKWTKSDTDLFYQGLRQFGSD-FAMIQQLFP-DKSRDQVRQKFK 735 569*****************.*****.******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 842 aa Download sequence
RCPPPLLPVL YLRAAGNRGL FKEGPKGSSS PSPGKHLRGV TRSKQLPGGH KGGLDMIDDE 60 ANFGDITDAP AEAEAAVKFH PNKLRGKLRK KSVPSRSVVP NHTVETSDEN AVALSQDNLS 120 QGLTTNQEIT SSTVLGSETI GGAEACGGTL YTPSDDVLTV SSVDRLSQDD DPHDDPSEVA 180 TLQENLVVSD TQASSTHPTS KTVDDLADFG ELFDTHSEEE NVAKSKLKIK VKLSKAASKS 240 RKTGQKKAAS TVDVVSQNKE DGNDDLRGCN DEQVQAPRHE EHVQTSDSQP PLGTDDGTVD 300 NFVNHNRILE EPGPEETAAK LRPKSQRKPG RASSKAVGTS DDHAEANLKD INASVDIDSE 360 DGLINPHTDD TQPIFGEPSA EAAATFLLDL GKKKGKGKSV TFVLPDDYEG VAATDTNHND 420 IRSDENLNTL PQQAPQKHCL TEEHSDDQEY TDRESQYHDG ERSDHGVEQQ SKLDVGKQEL 480 SMKLRSRTEI QKVGLSEHIV DDHLDEDFVE PSATEQNNDS GDENTAGGKQ KAPRKSRKKD 540 PNKEPLRGSK RTSTKSTSEK SQPNQQKNKS EVSSRGRKRA LKDTMTEQPE KKLTHRIRQK 600 RAQEVQTLLQ KPDHEIDRMK LSVTHLRLLQ EARERIQSKT PSGPSSSNQS SHFGDTDDFD 660 PFGDNYDNDR TENHALENAT KLNYHSYMDK KTRAKWTKSD TDLFYQGLRQ FGSDFAMIQQ 720 LFPDKSRDQV RQKFKSEDKK HPMQVHDAIL HRSRDNLYLK QVMKQLNIED SLKDINSTQK 780 QEVASTEGNT GNDVISETNI SVENVSNLSD EEMGTLQSEV KEGEDVAAGN ADDVDLDVFD 840 WY

Sequence ? help Back to Top

Protein Sequence Length: 842 aa Download sequence

RCPPPLLPVL YLRAAGNRGL FKEGPKGSSS PSPGKHLRGV TRSKQLPGGH KGGLDMIDDE  60
ANFGDITDAP AEAEAAVKFH PNKLRGKLRK KSVPSRSVVP NHTVETSDEN AVALSQDNLS  120
QGLTTNQEIT SSTVLGSETI GGAEACGGTL YTPSDDVLTV SSVDRLSQDD DPHDDPSEVA  180
TLQENLVVSD TQASSTHPTS KTVDDLADFG ELFDTHSEEE NVAKSKLKIK VKLSKAASKS  240
RKTGQKKAAS TVDVVSQNKE DGNDDLRGCN DEQVQAPRHE EHVQTSDSQP PLGTDDGTVD  300
NFVNHNRILE EPGPEETAAK LRPKSQRKPG RASSKAVGTS DDHAEANLKD INASVDIDSE  360
DGLINPHTDD TQPIFGEPSA EAAATFLLDL GKKKGKGKSV TFVLPDDYEG VAATDTNHND  420
IRSDENLNTL PQQAPQKHCL TEEHSDDQEY TDRESQYHDG ERSDHGVEQQ SKLDVGKQEL  480
SMKLRSRTEI QKVGLSEHIV DDHLDEDFVE PSATEQNNDS GDENTAGGKQ KAPRKSRKKD  540
PNKEPLRGSK RTSTKSTSEK SQPNQQKNKS EVSSRGRKRA LKDTMTEQPE KKLTHRIRQK  600
RAQEVQTLLQ KPDHEIDRMK LSVTHLRLLQ EARERIQSKT PSGPSSSNQS SHFGDTDDFD  660
PFGDNYDNDR TENHALENAT KLNYHSYMDK KTRAKWTKSD TDLFYQGLRQ FGSDFAMIQQ  720
LFPDKSRDQV RQKFKSEDKK HPMQVHDAIL HRSRDNLYLK QVMKQLNIED SLKDINSTQK  780
QEVASTEGNT GNDVISETNI SVENVSNLSD EEMGTLQSEV KEGEDVAAGN ADDVDLDVFD  840
WY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	3e-26	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG053140.12