PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG050560.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 235aa MW: 26063.6 Da PI: 5.1976 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 79.7 | 3.2e-25 | 43 | 102 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +Dg+ WrKYGqKe++++++pr Y+rCt++ gC+++++v+++++dp++ +itY g+H++ TRIDC1BG050560.4 43 EDGFIWRKYGQKEIHNNKHPRLYFRCTYKhdiGCQATRQVQQAEDDPSLYVITYFGDHTC 102 8***************************99999*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
GVSGGRKRKS GPGGADNLTR PKRRMRESSG EKEARVERRR TAEDGFIWRK YGQKEIHNNK 60 HPRLYFRCTY KHDIGCQATR QVQQAEDDPS LYVITYFGDH TCCQGDAAGA VLEAEDVKMQ 120 PFVINFGSAT ASSGKPWLSL PSDTDDGRRS DSGASRSSQV VCSLEEFEVK EVKVESTSEH 180 SHSTDPAAAE LSSSADFSCA SPAWDPLSGC LDWDRFGDSQ FDCEFMDFDA IPLFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 5e-23 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG050560.4 |