PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG050010.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 396aa    MW: 43512.8 Da    PI: 6.518
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG050010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.6e-1759107355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr+++ +grWv+e+r+p   + r kr++lg+f+ta +Aa a+++a+ +++g
  TRIDC1BG050010.1  59 YRGVRQRR-WGRWVSEVREP---N-RgKRHWLGTFDTAVDAALAYDRAAVAIYG 107
                       9****998.*******9998...3.35*********************988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MALFIAVCKT SEMCISLFAC STIRTKRARP KSSATLRIKT PVASPPGGEG GPEDRDHMYR  60
GVRQRRWGRW VSEVREPNRG KRHWLGTFDT AVDAALAYDR AAVAIYGSRA IVNFPSAFFI  120
STAQPVQCHS PSSSPATAAS VFVEHKLRPM LAAASVLTEH GVKPMMAAAS ILDEHEIKPV  180
ITASVSDERE VKPMVAASVF GEREVKPMVA ASVFHEREVK PMVPASVFGE REVKPVVAAS  240
VFGEREVKPM VAASVFHERE VKPMVPASVF GEREVRPMVA ASVSGEREVK PMVAASVFGE  300
REVKPMVAAS VFGEHEVKPT PVHGVGDDTW IAQHWDASWA EREEVYADYL KDIAMYIDVD  360
AITEKLVYHP GIYGKDYQVD GFDAEFTVSP LWELGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.14e-07ERF family protein