PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG049260.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 428aa MW: 45924.7 Da PI: 5.8909

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG049260.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.5	2.3e-13	199	250	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e+I++L+ TRIDC1BG049260.4 199 QRMTHIAVERNRRRQMNDYLRVLRSLMPGS---YVQRGDQASIIGGAIEFIRELE 250 79**************************...9****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
ASGFCTFVGC HGRSEQGSSH QLDTFAQLDG GAAPEEPIGG GAGAEMVDYM LGQTTPLPPG 60 GPHGQVSLDK LSFSDVLQFA DFGPRLALNQ PSADHDDARD DDEEDSYFFR FQSQLSGSDD 120 PDPRGGAGIH HAAEHEGSKT ADGSGGPHDH GGGVSESTTL VQQSDGGGRV GQKAGGEQAK 180 SGRRKRPRST KTSEEVESQR MTHIAVERNR RRQMNDYLRV LRSLMPGSYV QRGDQASIIG 240 GAIEFIRELE QLIQCLESQK RRRLYGDTPR PVADASAPVV PATSIHEPPP QGHEAPPFYV 300 SPSLSFPAAG NGDGAAGAKV MIDLDTCGGG LREEVAENKS SLADIEVRVL GEDAVIKVLS 360 RRRPEQLIKT IAELEEMHMS ILHTNITTIE QTVLYSFNVK VRASQDSRRR RSSAPSTRSS 420 ASSTSTTR

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

ASGFCTFVGC HGRSEQGSSH QLDTFAQLDG GAAPEEPIGG GAGAEMVDYM LGQTTPLPPG  60
GPHGQVSLDK LSFSDVLQFA DFGPRLALNQ PSADHDDARD DDEEDSYFFR FQSQLSGSDD  120
PDPRGGAGIH HAAEHEGSKT ADGSGGPHDH GGGVSESTTL VQQSDGGGRV GQKAGGEQAK  180
SGRRKRPRST KTSEEVESQR MTHIAVERNR RRQMNDYLRV LRSLMPGSYV QRGDQASIIG  240
GAIEFIRELE QLIQCLESQK RRRLYGDTPR PVADASAPVV PATSIHEPPP QGHEAPPFYV  300
SPSLSFPAAG NGDGAAGAKV MIDLDTCGGG LREEVAENKS SLADIEVRVL GEDAVIKVLS  360
RRRPEQLIKT IAELEEMHMS ILHTNITTIE QTVLYSFNVK VRASQDSRRR RSSAPSTRSS  420
ASSTSTTR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	200	211	RMTHIAVERNRR
2	260	264	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	2e-92	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG049260.4