PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG048240.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 455aa MW: 50003 Da PI: 6.1975

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG048240.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.1	2.4e-19	22	64	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT eE++ lvda++++G++ W+ Ia+ ++ gRt++++k++w+ TRIDC1BG048240.7 22 KEAWTLEEEQVLVDAHRMHGNK-WAEIAKLLP-GRTDNSIKNHWN 64 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MVVLVNNAER GWHNHLDPQI RKEAWTLEEE QVLVDAHRMH GNKWAEIAKL LPGRTDNSIK 60 NHWNSSVRKR LDEYDTGAAL PVPVHVSHND LKQVTMAPPA ENYIDLNKEP NISLSSVIVD 120 HSDPTHSPRV CSLKNIKGCS DFLSLSLPTA QPVTSCQASV ADDSAVALAI MGMKMNSGRD 180 KDMELNFVCQ KGLQINLPNE KGLEINSVTA KPDGEIDNTG RESTLVKEAQ SFGSLCYQIP 240 KLEDIDLVRS PVLSRHHGSE HGVDGFQSPT GYATPSPTDG IQSDQLSVES ILKSAAENFP 300 GTPSILRRRK RDKPTPSQDT DFKIDANSDG FDTPKANCTT YSPHSFKTAS FLSLGRLDDQ 360 QLPSVLGKFD VSPTYRLRSK RMAVLKTVEK HLDFSADVMD TCDMVGSLKS SCRNTESVNA 420 SSDISSAQDR RINGHMIGLE TLTSDFAHTT QLDAT

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MVVLVNNAER GWHNHLDPQI RKEAWTLEEE QVLVDAHRMH GNKWAEIAKL LPGRTDNSIK  60
NHWNSSVRKR LDEYDTGAAL PVPVHVSHND LKQVTMAPPA ENYIDLNKEP NISLSSVIVD  120
HSDPTHSPRV CSLKNIKGCS DFLSLSLPTA QPVTSCQASV ADDSAVALAI MGMKMNSGRD  180
KDMELNFVCQ KGLQINLPNE KGLEINSVTA KPDGEIDNTG RESTLVKEAQ SFGSLCYQIP  240
KLEDIDLVRS PVLSRHHGSE HGVDGFQSPT GYATPSPTDG IQSDQLSVES ILKSAAENFP  300
GTPSILRRRK RDKPTPSQDT DFKIDANSDG FDTPKANCTT YSPHSFKTAS FLSLGRLDDQ  360
QLPSVLGKFD VSPTYRLRSK RMAVLKTVEK HLDFSADVMD TCDMVGSLKS SCRNTESVNA  420
SSDISSAQDR RINGHMIGLE TLTSDFAHTT QLDAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	307	313	RRRKRDK
2	307	314	RRRKRDKP
3	308	314	RRRKRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	5e-30	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG048240.7