PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG046650.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 160aa MW: 16805.6 Da PI: 11.205 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.1 | 4.7e-14 | 92 | 136 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++++ +++G g+W+ I+r k+Rt+ q+ s+ qky TRIDC1BG046650.1 92 PWTEEEHRMFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKY 136 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
GWRVFVVVGA GGDAASAAAA QQAVDQGGGQ GVRERAGGDP GARAEPVGVR GGAAAGAHAA 60 GGVGALPGAG GRYRPHRARP GSGCEERRKG IPWTEEEHRM FLEGLEKYGR GDWRNISRWS 120 VKTRTPTQVA SHAQKYFIRQ ANAATRGDSK RKSIHDITNP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 2e-32 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG046650.1 |