PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG046300.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 186aa MW: 21403.4 Da PI: 9.9324

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG046300.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.8	2.1e-12	105	151	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+ WT +E+ l++++ +G g Wk I+ ++ +++t+ q+ s+ qky TRIDC1BG046300.1 105 RKYWTDDEHMLFLQGLGAYGRGKWKEISTHFVTTKTPVQVSSHAQKY 151 678*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
HTFPSVMAPN SPWSAMKATV EVEDQEPVIT GFNNNDRSYN GVNHDKNKKP DSLELRLWWP 60 CETMQQEDIR VMEEGKKVTM PVGNKVKVPE NGMSIRQSVI VPSARKYWTD DEHMLFLQGL 120 GAYGRGKWKE ISTHFVTTKT PVQVSSHAQK YFRRIKKGAL ERQRYSINDL ELKIVKPWTI 180 INNSSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	2e-20	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG046300.1