PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG045200.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 432aa MW: 47796.3 Da PI: 4.1207

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG045200.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.5	1.4e-49	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhPtd elv++yLk+k+ gkkl + e+i+ev++yk+ PwdLp k ++++++ ew+fF++rdkky++g+r+nrat +gyWk++gkd++ TRIDC1BG045200.1 6 LPPGFRFHPTDVELVSYYLKRKIMGKKLFV-EAISEVELYKFAPWDLPdKsCLQSKDLEWFFFCPRDKKYPKGSRTNRATPNGYWKTSGKDRT 97 79***********************999.89**********96347777888******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ vglkktL+f++g+apkg++tdWvm ey++ TRIDC1BG045200.1 98 IEL-NSRIVGLKKTLIFHEGKAPKGNRTDWVMYEYKM 133 .999***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MAQACLPPGF RFHPTDVELV SYYLKRKIMG KKLFVEAISE VELYKFAPWD LPDKSCLQSK 60 DLEWFFFCPR DKKYPKGSRT NRATPNGYWK TSGKDRTIEL NSRIVGLKKT LIFHEGKAPK 120 GNRTDWVMYE YKMEDETLVS AGFSKDAYVL CKIFKKSGLG PRIGEQYGAP FDENEWENLD 180 VGSSIFSFAP SSGVDDPQVE SSALATAIVM QEPSAPQQSV QFSEHVNICS DEVNDVPPEI 240 DGILLDELTK FLDDSPNHDV VFPENSGLPP MSELEAQAFE INTAELYDQL AGLTQSGDMS 300 AVNFPASNGD VIENNLQQTN SGLAMDDDYI GLDDLLAPGE TFSYDFSGET FSYDLPGGSF 360 SYDLSVPNNQ FLQYPLDQST NGSHYGVGAT QSTFEASGSL PPMQPMPSTF DDMPSVSRLL 420 NDAVIFVVIG AE

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MAQACLPPGF RFHPTDVELV SYYLKRKIMG KKLFVEAISE VELYKFAPWD LPDKSCLQSK  60
DLEWFFFCPR DKKYPKGSRT NRATPNGYWK TSGKDRTIEL NSRIVGLKKT LIFHEGKAPK  120
GNRTDWVMYE YKMEDETLVS AGFSKDAYVL CKIFKKSGLG PRIGEQYGAP FDENEWENLD  180
VGSSIFSFAP SSGVDDPQVE SSALATAIVM QEPSAPQQSV QFSEHVNICS DEVNDVPPEI  240
DGILLDELTK FLDDSPNHDV VFPENSGLPP MSELEAQAFE INTAELYDQL AGLTQSGDMS  300
AVNFPASNGD VIENNLQQTN SGLAMDDDYI GLDDLLAPGE TFSYDFSGET FSYDLPGGSF  360
SYDLSVPNNQ FLQYPLDQST NGSHYGVGAT QSTFEASGSL PPMQPMPSTF DDMPSVSRLL  420
NDAVIFVVIG AE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	1e-83	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG045200.1