PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG044620.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 182aa MW: 20372.3 Da PI: 9.9293 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.2 | 2.4e-29 | 27 | 77 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtf+kRrng+lKKA+ELSvLC+ae+a+i+fs +g+lyey+s TRIDC1BG044620.3 27 KRIENTTSRQVTFCKRRNGLLKKAYELSVLCEAEIALIVFSARGRLYEYAS 77 79***********************************************86 PP | |||||||
2 | K-box | 93.3 | 4e-31 | 101 | 181 | 9 | 89 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqe 89 + + +++ qqe+akL+ +i++Lq+ +R+l+Ge++++L+lkeL++Le++L+k++ +iR+kK+ell+++ie++qk e +lq+ TRIDC1BG044620.3 101 IDVNSQQYFQQESAKLRHQIQSLQNANRNLMGESVGNLTLKELKSLENRLDKGIGRIRAKKHELLFAEIEYMQKLEVDLQS 181 5667789**********************************************************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
LSITSASGLD SGLELLATMG RGKIEIKRIE NTTSRQVTFC KRRNGLLKKA YELSVLCEAE 60 IALIVFSARG RLYEYASNST RTTIDRYKKA SASASGSAPA IDVNSQQYFQ QESAKLRHQI 120 QSLQNANRNL MGESVGNLTL KELKSLENRL DKGIGRIRAK KHELLFAEIE YMQKLEVDLQ 180 SE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42830.1 | 1e-78 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG044620.3 |