PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG044620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 195aa MW: 22139.4 Da PI: 9.9913 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.1 | 2.8e-29 | 26 | 76 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtf+kRrng+lKKA+ELSvLC+ae+a+i+fs +g+lyey+s TRIDC1BG044620.1 26 KRIENTTSRQVTFCKRRNGLLKKAYELSVLCEAEIALIVFSARGRLYEYAS 76 79***********************************************86 PP | |||||||
2 | K-box | 105.8 | 5.3e-35 | 100 | 190 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + + +++ qqe+akL+ +i++Lq+ +R+l+Ge++++L+lkeL++Le++L+k++ +iR+kK+ell+++ie++qk e +lq+en++Lr+k++ TRIDC1BG044620.1 100 IDVNSQQYFQQESAKLRHQIQSLQNANRNLMGESVGNLTLKELKSLENRLDKGIGRIRAKKHELLFAEIEYMQKLEVDLQSENMYLRAKVA 190 5667789**********************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
SCPSPPLRDW TPELLATMGR GKIEIKRIEN TTSRQVTFCK RRNGLLKKAY ELSVLCEAEI 60 ALIVFSARGR LYEYASNSTR TTIDRYKKAS ASASGSAPAI DVNSQQYFQQ ESAKLRHQIQ 120 SLQNANRNLM GESVGNLTLK ELKSLENRLD KGIGRIRAKK HELLFAEIEY MQKLEVDLQS 180 ENMYLRAKVA DAERL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09960.1 | 6e-85 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG044620.1 |