PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG043410.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 133aa MW: 13873 Da PI: 9.4831 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 61.3 | 2.3e-19 | 86 | 133 | 1 | 48 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 +Cqv+gCead+ e+k yh+rh+vC +++a++v+++g ++r+CqqC++ TRIDC1BG043410.4 86 RCQVPGCEADIRELKGYHKRHRVCLRCAHASAVMIDGAQKRYCQQCGK 133 6*********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence |
SRRGVRKRDP RLVCPNYLAG IVPCACPELD EMAAAAEVEE VAAEVLAGPR KKPRAGSRGS 60 SGAVVKIGGG GGGSGVAGRG GAAEMRCQVP GCEADIRELK GYHKRHRVCL RCAHASAVMI 120 DGAQKRYCQQ CGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18830.3 | 2e-32 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG043410.4 |