PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG041800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 217aa MW: 22860.6 Da PI: 5.9615 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.8 | 6.3e-19 | 36 | 86 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + ++GVr++ +g+WvAeIr+p + r +r +lg+f ta +Aa+a++aa+++l+g TRIDC1BG041800.1 36 CPFRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFATALDAARAYDAAARALYG 86 679****999.**********8...3.35***********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MEQEVVAGMK QKKCCPLRRS RKGCMKGKGG PDNQQCPFRG VRQRTWGKWV AEIREPNRGA 60 RLWLGTFATA LDAARAYDAA ARALYGDCAR LNLSASPSQM QHPPAQGSGA NGNSAPGTPC 120 CSSNNSNSSA STPTGTPTDM DCSAWMQPSY CYSTAEAPED FEAYVTRLPK AEDFGLEGFQ 180 EVPLEVLAEA GGGVSIWDLS IAPDMAAAAA SSAAASA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 4e-29 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG041800.1 |