PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG039910.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 185aa MW: 19251.6 Da PI: 8.4623 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.2 | 2.4e-19 | 50 | 98 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +grW+AeIrdp++ +r++lg++ +aeeAa+a++ a++ ++g TRIDC1BG039910.2 50 YRGIRRRP-WGRWAAEIRDPRK---GARVWLGTYASAEEAARAYDVAARDIRG 98 9*******.**********954...4**********************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MCGGAVIADF VPAGARRPDG SSADVPGSSL TVTGEEVTEK SPAPGRKTAY RGIRRRPWGR 60 WAAEIRDPRK GARVWLGTYA SAEEAARAYD VAARDIRGPK AKLNFPPAVG APQEAAAVAG 120 AGAPKKRRIV AAEESSASWS PLPAPASGGG GGTDSLRERM SGLEAFLGLE DGNVEPWEAV 180 DLIME |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 2e-24 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG039910.2 |