PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG038950.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 154aa MW: 16915.4 Da PI: 7.7572 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 140.2 | 6.7e-44 | 9 | 108 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +Ca+Ck+lrr+C+kdC++ap fpa++p+kfa+vhk+FGasnv+k+l +lp ++r da+sslvyeA+ar+rdPvyG+vg i+ lq+q++ql+ + TRIDC1BG038950.3 9 PCASCKLLRRRCTKDCIFAPFFPADDPHKFAIVHKVFGASNVSKMLLELPVQQRGDAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQ 101 7******************************************************************************************** PP DUF260 94 lallkee 100 la++++e TRIDC1BG038950.3 102 LAVAQAE 108 ***9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
VAFMAGGSPC ASCKLLRRRC TKDCIFAPFF PADDPHKFAI VHKVFGASNV SKMLLELPVQ 60 QRGDAVSSLV YEANARVRDP VYGCVGAISF LQNQVSQLQM QLAVAQAEIL CIQMQQRDGC 120 QSQDDAGRSD GHSLAAMQQM VGQQDHLKRE SLWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30130.1 | 8e-73 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG038950.3 |