PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG038620.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 275aa    MW: 29384.4 Da    PI: 4.4338
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG038620.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-1890140155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  TRIDC1BG038620.1  90 PVYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 140
                       68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MAPARELQET SSSSSSSTSS YTTSSTSMSC SSTVTDSSSC PSSPASAANA VKAVPRKRQL  60
DEEEGGREET EEGKTKTTKK SKRSSDGKHP VYRGVRMRAW GKWVSEIREP RKKSRIWLGT  120
FPTAEMAARA HDVAALAIKG ARSAHLNFPE LADVLPRAAS PAPKDVQAAA ALAAAFTSSP  180
PPLSTDQSEE EEGLIQEETV KNDAGADATT PPESAATATS CGAAEQAEEE LQLFDLPDLL  240
LDIEDGFGFS TMWAPLPDVE EVNADLRLEE PLLWE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.17e-36ERF family protein