PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG038500.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 154aa MW: 16946.5 Da PI: 12.1637 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 40.3 | 5.2e-13 | 69 | 99 | 26 | 56 |
-HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 26 saeereeLAkklgLterqVkvWFqNrRakek 56 +++++ LA++lgL rqV vWFqNrRa+ k TRIDC1BG038500.5 69 HQKQKAALARQLGLRPRQVEVWFQNRRARTK 99 67899************************98 PP | |||||||
2 | HD-ZIP_I/II | 101 | 1e-32 | 62 | 134 | 18 | 91 |
HD-ZIP_I/II 18 FeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 F+ ++ +++++K++lar+Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL++ev+eLr +l TRIDC1BG038500.5 62 FDLRTLMHQKQKAALARQLGLRPRQVEVWFQNRRARTKLKQTEVDCESLKRCCETLTEENRRLQREVQELR-AL 134 667777899*************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
AASAARQRGA PAASRSVPAR AATTRTTPGP AAAGRARSSA CPRTSPLSSR TASRSTAPST 60 PFDLRTLMHQ KQKAALARQL GLRPRQVEVW FQNRRARTKL KQTEVDCESL KRCCETLTEE 120 NRRLQREVQE LRALKLLAPP APHLYMRAPP PTTL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 94 | 102 | RRARTKLKQ |
2 | 108 | 113 | ESLKRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 2e-32 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG038500.5 |