PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG038430.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 212aa MW: 23573.5 Da PI: 9.6132 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 20.1 | 1.4e-06 | 89 | 134 | 4 | 53 |
G2-like 4 lrWtpeLHerFveaveqLG.GsekAtPktilelmkvkgLtlehvkSHLQkY 53 + Wt+e H++F+e ++qLG G + + k+ v t ++v+SH QkY TRIDC1BG038430.3 89 IPWTEEEHRKFLEGLKQLGkGDWRGISKN----F-VTTRTATQVASHAQKY 134 67****************84555555554....4.5677999********* PP | |||||||
2 | Myb_DNA-binding | 49.4 | 1.1e-15 | 90 | 134 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++++ kqlG+g+W+ I++ + ++Rt+ q+ s+ qky TRIDC1BG038430.3 90 PWTEEEHRKFLEGLKQLGKGDWRGISKNFVTTRTATQVASHAQKY 134 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MEEEGAKKAV LFRLFGVEVR GAEEEDDAEP MELKKSTSMP NLACASTDPI LLPGEASNDK 60 GYASDDGELA STPQLKRRRR KAQERKKGIP WTEEEHRKFL EGLKQLGKGD WRGISKNFVT 120 TRTATQVASH AQKYFLRQTN PGKKKRRASL FDVGIPAGHS YDDQLPSPQS VGTKLAPAEK 180 ILHTDRGDVP LPSYPGDIRG NNNNNNNMQM QV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 76 | 81 | KRRRRK |
2 | 76 | 87 | KRRRRKAQERKK |
3 | 77 | 87 | RRRRKAQERKK |
4 | 143 | 147 | KKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61620.1 | 2e-34 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG038430.3 |