PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG038320.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 140aa MW: 15523.3 Da PI: 6.7997 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.9 | 1.1e-17 | 13 | 64 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr ++ +g+++AeIrdp k +r++lg+++ a eAa+a++ a+ +l+g+ TRIDC1BG038320.1 13 RYRGVRLRP-WGKFAAEIRDP---ArKGARVWLGTYDDAVEAARAYDCAAFRLRGP 64 7********.**********8...4445*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
VEGQEEYDDD FRRYRGVRLR PWGKFAAEIR DPARKGARVW LGTYDDAVEA ARAYDCAAFR 60 LRGPKAILNF PNEVGTQSIQ WTSPAPLADT IAAVPTGGKR MRPAQEEERL RVVKKERLQL 120 KEDDDEGAIA ANYSAAGGGA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 9e-32 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG038320.1 |