PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG037970.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 310aa    MW: 33026.3 Da    PI: 10.0157
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG037970.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix69.94.9e-2253142186
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       +Wt++e+laLiea+r+++e+l++g+l++++W+ev+ ++        +   +s +qC++k+e+l+kry+++++++ +r+++   ++p+f  l+
  TRIDC1BG037970.2  53 CWTHEETLALIEAYRDKWEALKKGNLRAADWDEVAGAVtarcgrFPTATYKSGVQCRHKIEKLRKRYRAERTRSMGRSKG--PKWPFFPLLH 142
                       8*************************************9988877778899************************98443..47****9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
KQDDVPSSPE LPPLAAPGIA AAAAAAAAAA SSGGGGGGVG AGGGSGRRLP PPCWTHEETL  60
ALIEAYRDKW EALKKGNLRA ADWDEVAGAV TARCGRFPTA TYKSGVQCRH KIEKLRKRYR  120
AERTRSMGRS KGPKWPFFPL LHDLAGGGVP DASPNPIIKI KPRGNATPAS PSPVSSPSSE  180
DAGRSRSLHG LISNGGGGSG LRFTIPKASR TKPGVPREAR PDRDRGEEDP EAEAMTEVAS  240
ALRAVGEGFL RMEERRLELS LQMEKERMES EMKRTQALLD AQQLFVEAFL GKQQPHHKKL  300
VSSAAAMEED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.15e-28Trihelix family protein