PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG037970.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 318aa MW: 33807.2 Da PI: 10.0157

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG037970.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	69.8	5.2e-22	61	150	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt++e+laLiea+r+++e+l++g+l++++W+ev+ ++ + +s +qC++k+e+l+kry+++++++ +r+++ ++p+f l+ TRIDC1BG037970.1 61 CWTHEETLALIEAYRDKWEALKKGNLRAADWDEVAGAVtarcgrFPTATYKSGVQCRHKIEKLRKRYRAERTRSMGRSKG--PKWPFFPLLH 150 8***********************************9988877778899********************98443..47**9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
TMSSSSSLKQ DDVPSSPELP PLAAPGIAAA AAAAAAAASS GGGGGGVGAG GGSGRRLPPP 60 CWTHEETLAL IEAYRDKWEA LKKGNLRAAD WDEVAGAVTA RCGRFPTATY KSGVQCRHKI 120 EKLRKRYRAE RTRSMGRSKG PKWPFFPLLH DLAGGGVPDA SPNPIIKIKP RGNATPASPS 180 PVSSPSSEDA GRSRSLHGLI SNGGGGSGLR FTIPKASRTK PGVPREARPD RDRGEEDPEA 240 EAMTEVASAL RAVGEGFLRM EERRLELSLQ MEKERMESEM KRTQALLDAQ QLFVEAFLGK 300 QQPHHKKLVS SAAAMEED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	4e-28	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG037970.1