PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG037690.18

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

STAT

Protein Properties

Length: 346aa MW: 38072.9 Da PI: 6.5002

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG037690.18	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	188.3	9.1e-59	50	171	1	121
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipk 91 l+vvl+na+g+ ++kd+++vasL+yad+g++veks ddae+pLLi+++G+e+++e+rpl++lrGra+fklkisqLsskcdn+Lfri+f++++ TRIDC1BG037690.18 50 LEVVLTNAFGEHMNKDTQIVASLVYADNGALVEKSrDDAEPPLLIACEGLEYPAESRPLRILRGRALFKLKISQLSSKCDNKLFRIYFSTLH 141 79*******************************9**************************************************** PP STAT 92 lkkypfleavskpirCisrsrntrsssltk 121 +kypflea skpirCisr r +r++s++k TRIDC1BG037690.18 142 TRKYPFLEASSKPIRCISRGRPSRPLSAAK 171 **********************999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MIGTIQEQYA ENPPSKLSID YSCCDGIEEG DDGIWCIVGG KASCRRNFML EVVLTNAFGE 60 HMNKDTQIVA SLVYADNGAL VEKSRDDAEP PLLIACEGLE YPAESRPLRI LRGRALFKLK 120 ISQLSSKCDN KLFRIYFSTL HTRKYPFLEA SSKPIRCISR GRPSRPLSAA KRTSSATVDE 180 IHLLNNGQGL DRDGKANACS LSQDQSSVAC LHPSKFLKVE GDGTETHKMV SQSKQARKMV 240 VEAQSVRTES TMSDSDSIDA RSSWSGSDKD EAETLSDAMI FRYCLEGTYE RSTFLKGAAS 300 SINVDDLITL ANEVSLYSGC SHHRGCCNLE HNLKEQGTCS LVIRSS

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MIGTIQEQYA ENPPSKLSID YSCCDGIEEG DDGIWCIVGG KASCRRNFML EVVLTNAFGE  60
HMNKDTQIVA SLVYADNGAL VEKSRDDAEP PLLIACEGLE YPAESRPLRI LRGRALFKLK  120
ISQLSSKCDN KLFRIYFSTL HTRKYPFLEA SSKPIRCISR GRPSRPLSAA KRTSSATVDE  180
IHLLNNGQGL DRDGKANACS LSQDQSSVAC LHPSKFLKVE GDGTETHKMV SQSKQARKMV  240
VEAQSVRTES TMSDSDSIDA RSSWSGSDKD EAETLSDAMI FRYCLEGTYE RSTFLKGAAS  300
SINVDDLITL ANEVSLYSGC SHHRGCCNLE HNLKEQGTCS LVIRSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	1e-57	STAT family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG037690.18