PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC1BG037690.17 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | STAT | ||||||||
Protein Properties | Length: 343aa MW: 37758.6 Da PI: 6.5002 | ||||||||
Description | STAT family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | STAT | 188.3 | 8.9e-59 | 50 | 171 | 1 | 121 |
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipk 91 l+vvl+na+g+ ++kd+++vasL+yad+g++veks ddae+pLLi+++G+e+++e+rpl++lrGra+fklkisqLsskcdn+Lfri+f++++ TRIDC1BG037690.17 50 LEVVLTNAFGEHMNKDTQIVASLVYADNGALVEKSrDDAEPPLLIACEGLEYPAESRPLRILRGRALFKLKISQLSSKCDNKLFRIYFSTLH 141 79*********************************9******************************************************** PP STAT 92 lkkypfleavskpirCisrsrntrsssltk 121 +kypflea skpirCisr r +r++s++k TRIDC1BG037690.17 142 TRKYPFLEASSKPIRCISRGRPSRPLSAAK 171 ************************999876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 343 aa Download sequence |
MIGTIQEQYA ENPPSKLSID YSCCDGIEEG DDGIWCIVGG KASCRRNFML EVVLTNAFGE 60 HMNKDTQIVA SLVYADNGAL VEKSRDDAEP PLLIACEGLE YPAESRPLRI LRGRALFKLK 120 ISQLSSKCDN KLFRIYFSTL HTRKYPFLEA SSKPIRCISR GRPSRPLSAA KRTSSATVDE 180 IHLLNNGQGL DRDGKANACS LSQDQSSVAC LHPSKFLKVE GDGTETHKMS KQARKMVVEA 240 QSVRTESTMS DSDSIDARSS WSGSDKDEAE TLSDAMIFRY CLEGTYERST FLKGAASSIN 300 VDDLITLANE VSLYSGCSHH RGCCNLEHNL KEQGTCSLVI RSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G78540.1 | 1e-57 | STAT family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC1BG037690.17 |