PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG036990.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 542aa    MW: 56976.2 Da    PI: 6.4711
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG036990.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS292.61e-891835412374
              GRAS   2 velLlecAeavssgdlelaqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                       v++L e+A++ ++gd+  a+++Larl+ +   a  +g+p+ R a+yf+eAL+  l+       ++ +p ++++++++ +l a+k+fsevsP+l
  TRIDC1BG036990.1 183 VDQLAEAAKFAEAGDAFGAREILARLNYRlpaAPAAGTPLLRSAFYFKEALRLALSP----NGETPAPPASTPYDVVLKLGAYKAFSEVSPVL 271
                       689*************************999455566*******************9....45566777778899****************** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       +f+hlt+ qa+l+ + g+ ++H++Dfdi++G QW++L+q+La+R +++  l++T+++sp+s++  el+ ++e+L++fA+elgv f+f+v+   
  TRIDC1BG036990.1 272 QFAHLTCVQAVLDGLRGAGCIHVLDFDIGMGEQWASLMQELAQR-RPATALKVTALVSPASHHPLELQLIHENLSSFAAELGVFFQFTVF--- 360
                       *******************************************9.7889****************************************9... PP

              GRAS 185 rledleleeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       ++++l++ eL     g+alaV+l +   +          + ++vL+lvksl +kvvv v++ +d+++ +F++++++a++  + l++s++a  +
  TRIDC1BG036990.1 361 NIDTLDPAELVAIAgGDALAVHLPVGAAHAA--------AMPAVLRLVKSLGAKVVVSVDRGCDRTELPFAAHLFQAFQSTVFLLESVDAV-G 444
                       999999999965555**********999997........4566*********************************************988.7 PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLv 368
                       ++ +++ k+Er+l++++++++v  ++++    ++    Wr+ + +aGF+pv+ s++a++qa++ll+kv+++g+rve++  gsl+l+W++ +Lv
  TRIDC1BG036990.1 445 TDPDTAGKIERFLVQPAVEQCVVGRHRA--SIEKAPLPWRAVFASAGFTPVQASTFAESQAESLLHKVPVRGFRVEKRaPGSLCLYWQRAELV 535
                       888*******************987777..55556699**************************************88478999********* PP

              GRAS 369 svSaWr 374
                       svSaWr
  TRIDC1BG036990.1 536 SVSAWR 541
                       *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    
AAPGVKEEWA HQLAPLDMGM GLGAGEGWDG TAPSGLAGPD STFLRWIIGG GEDASAGMAG  60
VMDPPALELD HATSMMSPPA ASLGPSLSPF APAMEDAKGA PFGHAPSFLL HQHQHHPQPH  120
AAFFGAHPSF ESAPPPPKRH HPMAGAPAPK LPAFQGHHAP AGGFFPALKP KAGTANDEAA  180
ATVDQLAEAA KFAEAGDAFG AREILARLNY RLPAAPAAGT PLLRSAFYFK EALRLALSPN  240
GETPAPPAST PYDVVLKLGA YKAFSEVSPV LQFAHLTCVQ AVLDGLRGAG CIHVLDFDIG  300
MGEQWASLMQ ELAQRRPATA LKVTALVSPA SHHPLELQLI HENLSSFAAE LGVFFQFTVF  360
NIDTLDPAEL VAIAGGDALA VHLPVGAAHA AAMPAVLRLV KSLGAKVVVS VDRGCDRTEL  420
PFAAHLFQAF QSTVFLLESV DAVGTDPDTA GKIERFLVQP AVEQCVVGRH RASIEKAPLP  480
WRAVFASAGF TPVQASTFAE SQAESLLHKV PVRGFRVEKR APGSLCLYWQ RAELVSVSAW  540
RC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.14e-84GRAS family protein