PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG033970.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 297aa    MW: 31444.4 Da    PI: 8.5078
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG033970.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY77.15.8e-244198461
             YABBY  4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaes 61
                         seq+Cyv+C fC+t+l+vsvPs+slfk+vtvrCGhC+sll+v+++     ++++ 
  TRIDC1BG033970.2 41 EAPSEQLCYVHCHFCDTVLVVSVPSSSLFKTVTVRCGHCSSLLTVDMRGLLFPTTTTT 98
                      5689******************************************998775554444 PP

2YABBY132.74.7e-41193257107170
             YABBY 107 eevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                       e +pr+ p v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl
  TRIDC1BG033970.2 193 EPSPRTNPvVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 257
                       5567887769*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MSSSSSSGAS AAFTPVSQQQ QQMASESLSS ELQPPASMQP EAPSEQLCYV HCHFCDTVLV  60
VSVPSSSLFK TVTVRCGHCS SLLTVDMRGL LFPTTTTTVA AESAASAVTT TTSPPPAAAA  120
HHGQFHYPSS LNLTPGNPPR HSLLDEISSA NPSLQLLDQH GLGGLIAAAG GRNTAAPAPL  180
PPPPVAAGKG GKEPSPRTNP VVNRPPEKRQ RVPSAYNRFI KDEIQRIKAG NPDISHREAF  240
SAAAKNWAHF PHIHFGLMPD HQGLRKTSLL PQDHQRKDGH GLLKEGLYAA NMGIAPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-45YABBY family protein