PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG033940.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 637aa MW: 67951 Da PI: 9.5724

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG033940.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	98.5	5.7e-31	78	162	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r++ lk+plWeevs+k++e+g++r++k+Ckek+en++k+yk++k+++ +r ++ +t+++f+qlea TRIDC1BG033940.8 78 RWPRQETLALLKIRSDMDAAFRDATLKGPLWEEVSRKLAEEGYRRNAKKCKEKFENVHKYYKRTKDSRAGR--NDGKTYRFFRQLEA 162 8******************************************************************97..56668*****85 PP
2	trihelix	109.2	2.7e-34	458	543	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r++++ r++++ k+plWee+s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+qlea TRIDC1BG033940.8 458 RWPKTEVHALIQLRSNLDMRYQEAGPKGPLWEEISAGMRRMGYNRSSKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLEA 543 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
LHTPEMPPFS PSRTTGQQRI SMAEAPSPIS SRPPAPGPPP QQQQQLNNEL AGAGAVAFDE 60 EALAAGEEGL GGGAGGNRWP RQETLALLKI RSDMDAAFRD ATLKGPLWEE VSRKLAEEGY 120 RRNAKKCKEK FENVHKYYKR TKDSRAGRND GKTYRFFRQL EAMQSTAAPT ASAPPPATAV 180 GVPGVVVPTA VRPLAEPPPV GAAAAATAGL PTPVVVGNLS FSTSNTEEYS DEDDSDNEGT 240 DDMGGGADER GKRKRTSEGG AAAGSGGDAG SGKMMRFFEG LMKQVMERQE AMQQRFLEAI 300 EKREQDRMIR EEAWRRQEMA RLAREQEILG QERAMAATRD AAVLSFIQKI TGQTIPMPSI 360 AAQSAAPVPA RPSSSQPPAT HSPPQPQPSP RQQKPPTMPP VTPQPHKSPA PATPQLQQQA 420 PVVNSSCMDI VVAPPSEAPH DSSGYDGSGG GSGPASSRWP KTEVHALIQL RSNLDMRYQE 480 AGPKGPLWEE ISAGMRRMGY NRSSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ 540 LEALYRNKAA LGSPSGGGGA LALPPPAEHA NAAPQERIEA FTVAAPISQT APQQPPVAKN 600 DASNAGNGNG NGGGVSAGVS GGVQRLAASN GGSRFVF

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

LHTPEMPPFS PSRTTGQQRI SMAEAPSPIS SRPPAPGPPP QQQQQLNNEL AGAGAVAFDE  60
EALAAGEEGL GGGAGGNRWP RQETLALLKI RSDMDAAFRD ATLKGPLWEE VSRKLAEEGY  120
RRNAKKCKEK FENVHKYYKR TKDSRAGRND GKTYRFFRQL EAMQSTAAPT ASAPPPATAV  180
GVPGVVVPTA VRPLAEPPPV GAAAAATAGL PTPVVVGNLS FSTSNTEEYS DEDDSDNEGT  240
DDMGGGADER GKRKRTSEGG AAAGSGGDAG SGKMMRFFEG LMKQVMERQE AMQQRFLEAI  300
EKREQDRMIR EEAWRRQEMA RLAREQEILG QERAMAATRD AAVLSFIQKI TGQTIPMPSI  360
AAQSAAPVPA RPSSSQPPAT HSPPQPQPSP RQQKPPTMPP VTPQPHKSPA PATPQLQQQA  420
PVVNSSCMDI VVAPPSEAPH DSSGYDGSGG GSGPASSRWP KTEVHALIQL RSNLDMRYQE  480
AGPKGPLWEE ISAGMRRMGY NRSSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ  540
LEALYRNKAA LGSPSGGGGA LALPPPAEHA NAAPQERIEA FTVAAPISQT APQQPPVAKN  600
DASNAGNGNG NGGGVSAGVS GGVQRLAASN GGSRFVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	3e-49	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG033940.8